Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015896335.1_cds_XP_016447869.1_42583
CDS Infomation

[gene=LOC107772926] [db_xref=GeneID:107772926] [protein=transcription factor bHLH62-like] [protein_id=XP_016447869.1] [location=join(685..1422,1508..1732,1857..1922,2016..2084,2156..2227,2310..2504,2767..2866,2986..3014)] [gbkey=CDS]
Sequence

ATGGAGAAAGATTACTTCATGAATGGTGGAATTACTAATCCGCCCCTTCAATTCGAACCC
ACTATGACATTCCCTTCTAACTGGAATTCCCTACATTCAGGGCAGTCTTCTGATTTTTTC
CTCAACCCCAATTGGGATCACGACTCTACACATCAATTTGACTCAACTTTGAACTCAATA
GTGTCTTCTTCCCCTGCTGAATTAATTGGTAAAGTGACCACAGTTTGCAGCTCCCCTCAA
CCGCCATTCAACAATAATAATACTAATAATTCATGTTACACTACACCGAAATTACAAATG
CCCAATTTGGGAAATTCACTTCCTTTAAATCCTCCTCCTGTTCCATTGCCTGCTGTCTCT
GCTGATCCTGGTTTTGCCCAAAGAGCTGCTAAATTTTCTTGTTTTGGTAGCCGTAGTTTT
AACGGTAGAACAAGTCCATGGGGGGAATTGACACATAGATATGCTCAACAATTGGGGAAT
GGAAAGTTGCCTAGAGTTTCGAGTAGCCCTTCTTTGAAGCAAGCTGGATCCCCTTTGCAA
ATCAAGAATTCGGGCCAAACAAGGATGGAATTGATGTCTACAAATTTGTGCAGGCCTGTC
ACTAATTCTAATGAGCCTGTTTCTGAGCCAAGTGGAGAAACAGGGCCAAAAACTCCAACT
GAATTGAATTCTACTAGAAAAAGAAAAACAGCTTCAAGAGGGAAAACAAAAGAAGATGCC
CCTGCAAATGGAAACATGGGAGGTGAAGGTGATGATAATGCAAGAACAAAGCGATGTAAA
CAAGTAGAAGGTAATGAGACAGAAACTGGAACAGTTAACATGGAGGAAACAAAGGGCAAT
GAAGGTGATGAAACTCAAAATCAAACTATAGAAAATCAAAAGCCTCCTGAGCCACCAAAG
GACTATATTCATGTTAGAGCAAGGAGAGGACAAGCTACTGATAGCCATAGTCTAGCTGAA
AGAGTCCGACGAGAGAAGATTAGTGAAAGAATGAAGCTTTTACAAGATCTTGTACCAGGC
TGTAATAAGGTGACAGGAAAAGCATTAATGCTTGACGAAATTATAAATTATGTACAGTCA
CTGCAACGACAAGTCGAGTTCCTATCCATGAAGTTGGCTTCAGTGAACCCAAGTTTGGAT
TTTCCAGCAGAAAATCTTCTTCCAAAGGATATATGTCAACCAAATGGCTCTCTGCCCCAA
CCTGTTTTCCCAGTAGATTACCAACAACCCCGGCAACAACTTTCCAGTGATATTCCTAAT
GGGGTACTAAGCCAATGCTCGGCGAACACGTTAGATAACTCACTGTTTCGCACTCTAGGA
ATGCAATTGCCTTCCCTAGATGGACTTGGTCAATATCTTAATCAGTTCCCTACAATGTGC
GAGGATGACCTGCAAAGCATTGTGCAGATGGGATTTACCCAAAATCCCAACAAGGATCTG
ACATTGCAGTCACAAAGTTTTCCTGGGCCTCATCAAACGTCTCACATNATTTAG

Peptide Sequence

PEP ID

XP_016447869.1
PEP Infomation

PREDICTED: transcription factor bHLH62-like [Nicotiana tabacum]
Sequence

MEKDYFMNGGITNPPLQFEPTMTFPSNWNSLHSGQSSDFFLNPNWDHDSTHQFDSTLNSI
VSSSPAELIGKVTTVCSSPQPPFNNNNTNNSCYTTPKLQMPNLGNSLPLNPPPVPLPAVS
ADPGFAQRAAKFSCFGSRSFNGRTSPWGELTHRYAQQLGNGKLPRVSSSPSLKQAGSPLQ
IKNSGQTRMELMSTNLCRPVTNSNEPVSEPSGETGPKTPTELNSTRKRKTASRGKTKEDA
PANGNMGGEGDDNARTKRCKQVEGNETETGTVNMEETKGNEGDETQNQTIENQKPPEPPK
DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQS
LQRQVEFLSMKLASVNPSLDFPAENLLPKDICQPNGSLPQPVFPVDYQQPRQQLSSDIPN
GVLSQCSANTLDNSLFRTLGMQLPSLDGLGQYLNQFPTMCEDDLQSIVQMGFTQNPNKDL
TLQSQSFPGPHQTSHXI

Transcript Sequence

Gene sequence data has not been registered.